Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCDC168Q8NDH2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 HINT2P1-201ENST00000419438 481 ntBASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CCDC168Q8NDH2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC079316.1-201ENST00000548397 411 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ACTG1P17-201ENST00000558391 1119 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 MIR4722-201ENST00000578292 60 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC010328.2-201ENST00000597698 1111 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC090340.1-201ENST00000620778 4980 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC092978.1-202ENST00000637590 1327 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 MIR5189-201ENST00000577370 114 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 RN7SL560P-201ENST00000577943 264 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 AL671710.1-201ENST00000610245 2349 ntBASIC13.76□□□□□ -0.21
CCDC168Q8NDH2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms