Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 FAM86C2P-203ENST00000528684 1004 ntBASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 AC243562.1-201ENST00000560672 389 ntBASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 MIR3687-2-201ENST00000577708 61 ntBASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 MIR4469-201ENST00000583919 79 ntBASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 MIR3687-1-201ENST00000614492 61 ntBASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC4Q8N9L1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 CEND1P1-201ENST00000451006 455 ntBASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 KRT8P48-201ENST00000515599 1220 ntBASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AL135744.1-201ENST00000565098 629 ntBASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AL138918.1-201ENST00000568306 659 ntBASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC023511.2-201ENST00000618803 211 ntBASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC4Q8N9L1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC4Q8N9L1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms