Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AKR1C7P-201ENST00000305623 895 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 PAWRP1-201ENST00000451083 565 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 SART3-203ENST00000546611 1184 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AC091304.2-201ENST00000564639 760 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MIR4492-201ENST00000581627 80 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AL121772.3-201ENST00000610840 674 ntBASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 KRT8P39-201ENST00000396270 1433 ntBASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AL596087.1-201ENST00000400979 1969 ntBASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 MPDU1-223ENST00000582151 728 ntBASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AL139424.1-201ENST00000607572 797 ntBASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AL022326.1-202ENST00000641533 845 ntBASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN22Q8N7P3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms