Protein–RNA interactions for Protein: Q8N488

RYBP, RING1 and YY1-binding protein, humanhuman

Predicted RBP Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYBPQ8N488 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RYBPQ8N488 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.07■□□□□ 0.32
RYBPQ8N488 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RYBPQ8N488 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 RPS8P6-201ENST00000426177 609 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 HTR5BP-201ENST00000430851 1154 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.07■□□□□ 0.32
RYBPQ8N488 MPDU1-223ENST00000582151 728 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.07■□□□□ 0.32
RYBPQ8N488 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.07■□□□□ 0.32
RYBPQ8N488 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.07■□□□□ 0.32
RYBPQ8N488 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 AL691403.2-201ENST00000618460 490 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
RYBPQ8N488 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RYBPQ8N488 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RYBPQ8N488 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 AC131009.4-201ENST00000624048 1740 ntBASIC17.07■□□□□ 0.32
RYBPQ8N488 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYBPQ8N488 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
RYBPQ8N488 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.06■□□□□ 0.32
RYBPQ8N488 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 HCG4-201ENST00000418983 998 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.06■□□□□ 0.32
RYBPQ8N488 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 AC087641.1-201ENST00000557561 1021 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.06■□□□□ 0.32
RYBPQ8N488 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 AC091812.2-201ENST00000619081 385 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 AC055717.3-201ENST00000622967 595 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 SLC22A20-204ENST00000530038 1673 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.06■□□□□ 0.32
RYBPQ8N488 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.06■□□□□ 0.32
RYBPQ8N488 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYBPQ8N488 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.06■□□□□ 0.32
RYBPQ8N488 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RYBPQ8N488 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RYBPQ8N488 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 AC105020.1-201ENST00000435356 2205 ntBASIC17.05■□□□□ 0.32
RYBPQ8N488 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.05■□□□□ 0.32
RYBPQ8N488 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYBPQ8N488 HMGA1P7-201ENST00000406908 502 ntBASIC17.05■□□□□ 0.32
RYBPQ8N488 AC211486.1-202ENST00000416371 468 ntBASIC17.05■□□□□ 0.32
RYBPQ8N488 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.05■□□□□ 0.32
RYBPQ8N488 CEND1P1-201ENST00000451006 455 ntBASIC17.05■□□□□ 0.32
RYBPQ8N488 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.05■□□□□ 0.32
RYBPQ8N488 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.05■□□□□ 0.32
RYBPQ8N488 AC211476.1-201ENST00000503899 468 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms