Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SIX5Q8N196 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX5Q8N196 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX5Q8N196 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17■□□□□ 0.31
SIX5Q8N196 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SIX5Q8N196 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17■□□□□ 0.31
SIX5Q8N196 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SIX5Q8N196 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 OR6D1P-202ENST00000641007 5290 ntBASIC17■□□□□ 0.31
SIX5Q8N196 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17■□□□□ 0.31
SIX5Q8N196 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
SIX5Q8N196 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 AC092658.1-201ENST00000505836 891 ntBASIC17■□□□□ 0.31
SIX5Q8N196 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17■□□□□ 0.31
SIX5Q8N196 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17■□□□□ 0.31
SIX5Q8N196 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 WASH4P-201ENST00000564273 1246 ntBASIC17■□□□□ 0.31
SIX5Q8N196 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17■□□□□ 0.31
SIX5Q8N196 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17■□□□□ 0.31
SIX5Q8N196 RN7SL828P-201ENST00000607615 303 ntBASIC17■□□□□ 0.31
SIX5Q8N196 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SIX5Q8N196 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SIX5Q8N196 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX5Q8N196 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17■□□□□ 0.31
SIX5Q8N196 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.99■□□□□ 0.31
SIX5Q8N196 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.99■□□□□ 0.31
SIX5Q8N196 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.99■□□□□ 0.31
SIX5Q8N196 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
SIX5Q8N196 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 AC106886.1-201ENST00000568660 600 ntBASIC16.99■□□□□ 0.31
SIX5Q8N196 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.99■□□□□ 0.31
SIX5Q8N196 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SIX5Q8N196 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SIX5Q8N196 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SIX5Q8N196 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SIX5Q8N196 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SIX5Q8N196 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.98■□□□□ 0.31
SIX5Q8N196 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SIX5Q8N196 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SIX5Q8N196 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.98■□□□□ 0.31
SIX5Q8N196 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms