Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 AC018712.1-201ENST00000455767 687 ntBASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 AL356488.2-201ENST00000602755 427 ntBASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 IGHV3-65-201ENST00000523210 341 ntBASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 GPAA1P2-202ENST00000606848 1787 ntBASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC83Q8IWF9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AC087641.1-201ENST00000557561 1021 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AC105339.3-201ENST00000560043 636 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 AL121912.1-201ENST00000603683 238 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 PCGF3-213ENST00000620529 1899 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 MIR1199-201ENST00000621445 119 ntBASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC83Q8IWF9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms