Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 AC005912.2-201ENST00000619492 2400 ntBASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 LINC00552-201ENST00000625151 2579 ntBASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.65□□□□□ -0.06
LYSMD2Q8IV50 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 GPR89P-201ENST00000407924 1495 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AC020658.6-201ENST00000623564 1870 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AC026396.1-201ENST00000419388 421 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 UBE2SP1-201ENST00000450587 669 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 EGLN1P1-201ENST00000531623 762 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AC142381.4-202ENST00000563973 229 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AC004263.2-201ENST00000617183 678 ntBASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD2Q8IV50 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AC232323.1-201ENST00000540724 2099 ntBASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 REXO1L5P-201ENST00000622260 2098 ntBASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AC096633.1-201ENST00000422446 749 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms