Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.63■□□□□ 0.25
LDB1Q86U70 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.63■□□□□ 0.25
LDB1Q86U70 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB1Q86U70 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB1Q86U70 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LDB1Q86U70 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB1Q86U70 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LDB1Q86U70 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LDB1Q86U70 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
LDB1Q86U70 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB1Q86U70 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB1Q86U70 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.62■□□□□ 0.25
LDB1Q86U70 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB1Q86U70 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LDB1Q86U70 AC012569.1-201ENST00000591191 1524 ntBASIC16.62■□□□□ 0.25
LDB1Q86U70 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LDB1Q86U70 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.62■□□□□ 0.25
LDB1Q86U70 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.62■□□□□ 0.25
LDB1Q86U70 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB1Q86U70 Z83851.2-201ENST00000609564 659 ntBASIC16.62■□□□□ 0.25
LDB1Q86U70 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.62■□□□□ 0.25
LDB1Q86U70 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LDB1Q86U70 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB1Q86U70 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.61■□□□□ 0.25
LDB1Q86U70 HCG4B-203ENST00000450128 991 ntBASIC16.61■□□□□ 0.25
LDB1Q86U70 AL513480.1-201ENST00000451731 511 ntBASIC16.61■□□□□ 0.25
LDB1Q86U70 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LDB1Q86U70 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 AP001350.2-201ENST00000625104 1094 ntBASIC16.61■□□□□ 0.25
LDB1Q86U70 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.61■□□□□ 0.25
LDB1Q86U70 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 AC008894.3-201ENST00000624324 3103 ntBASIC16.61■□□□□ 0.25
LDB1Q86U70 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.61■□□□□ 0.25
LDB1Q86U70 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LDB1Q86U70 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LDB1Q86U70 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LDB1Q86U70 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LDB1Q86U70 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms