Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 KRT8P12-202ENST00000472924 1397 ntBASIC13.64□□□□□ -0.23
VPS13CQ709C8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 AL589702.1-201ENST00000641229 1509 ntBASIC13.64□□□□□ -0.23
VPS13CQ709C8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 AC007431.3-201ENST00000623221 587 ntBASIC13.64□□□□□ -0.23
VPS13CQ709C8 LINC01451-201ENST00000623792 534 ntBASIC13.64□□□□□ -0.23
VPS13CQ709C8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 AL033527.5-202ENST00000641632 1098 ntBASIC13.64□□□□□ -0.23
VPS13CQ709C8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13CQ709C8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS13CQ709C8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 MIR4492-201ENST00000581627 80 ntBASIC13.63□□□□□ -0.23
VPS13CQ709C8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 TPRX2P-201ENST00000535362 881 ntBASIC13.63□□□□□ -0.23
VPS13CQ709C8 WFDC1-204ENST00000613603 549 ntBASIC13.63□□□□□ -0.23
VPS13CQ709C8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VPS13CQ709C8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13CQ709C8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 C2orf69P2-201ENST00000562032 1123 ntBASIC13.62□□□□□ -0.23
VPS13CQ709C8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13CQ709C8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13CQ709C8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms