Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 AC131009.4-201ENST00000624048 1740 ntBASIC15□□□□□ -0.01
NHLRC1Q6VVB1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 AC145285.3-201ENST00000564603 959 ntBASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NHLRC1Q6VVB1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AL512652.2-201ENST00000625156 1716 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AL671710.1-201ENST00000610245 2349 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 IGLL3P-201ENST00000412472 434 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 VN2R19P-201ENST00000442399 1052 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC108751.1-201ENST00000490852 363 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC005412.3-201ENST00000580309 715 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC010654.1-201ENST00000615722 808 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 AC007950.2-201ENST00000615045 2347 ntBASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NHLRC1Q6VVB1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms