Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 AP002490.2-201ENST00000524791 560 ntBASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 AC092337.1-201ENST00000568699 1129 ntBASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNKSR3Q6P9H4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AC092658.1-201ENST00000505836 891 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AP005482.1-201ENST00000563722 1273 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 WFDC1-204ENST00000613603 549 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AL512652.2-201ENST00000625156 1716 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 AC092068.3-201ENST00000587894 2016 ntBASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNKSR3Q6P9H4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AL391256.1-201ENST00000443260 1855 ntBASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 MIR4259-201ENST00000584466 101 ntBASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 TMEM261P1-201ENST00000604899 340 ntBASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AC074044.1-201ENST00000609673 707 ntBASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNKSR3Q6P9H4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms