Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AC243591.1-201ENST00000452967 1364 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PI4KAP1-204ENST00000612579 1703 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AP002414.3-201ENST00000589352 1468 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AP002414.1-201ENST00000391405 1147 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AC092910.1-201ENST00000482027 1129 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AL356488.2-201ENST00000602755 427 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 MIR7706-201ENST00000613747 67 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AC005593.1-201ENST00000624894 515 ntBASIC15.19■□□□□ 0.02
NIPAL3Q6P499 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.19■□□□□ 0.02
NIPAL3Q6P499 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NIPAL3Q6P499 AC073621.1-201ENST00000392730 636 ntBASIC15.18■□□□□ 0.02
NIPAL3Q6P499 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms