Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 SLC22A20-204ENST00000530038 1673 ntBASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
TTC39BQ5VTQ0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 AC140658.5-201ENST00000438532 169 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 AC112191.1-201ENST00000523689 701 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 AC005829.1-201ENST00000570002 483 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 MIR3909-201ENST00000579518 119 ntBASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC39BQ5VTQ0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 AC002056.1-201ENST00000395613 760 ntBASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC39BQ5VTQ0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms