Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 LINC01144-201ENST00000626198 1710 ntBASIC20.22■□□□□ 0.83
TNNI3KQ59H18 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNNI3KQ59H18 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 AC005052.1-201ENST00000625181 2492 ntBASIC20.21■□□□□ 0.83
TNNI3KQ59H18 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.21■□□□□ 0.83
TNNI3KQ59H18 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TNNI3KQ59H18 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
TNNI3KQ59H18 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 RBPMS2P1-201ENST00000437762 623 ntBASIC20.2■□□□□ 0.82
TNNI3KQ59H18 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 LINC00628-201ENST00000628516 1289 ntBASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms