Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 AC092474.2-201ENST00000424288 719 ntBASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 AC020765.3-201ENST00000613051 740 ntBASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 LINC01144-201ENST00000626198 1710 ntBASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTPN20Q4JDL3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 AC016027.1-202ENST00000607927 1699 ntBASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN20Q4JDL3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN20Q4JDL3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms