Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AC007967.3-201ENST00000434308 558 ntBASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AP003680.1-201ENST00000598970 3660 ntBASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AL109954.1-202ENST00000564051 2148 ntBASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 AL671710.1-201ENST00000610245 2349 ntBASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 KRT8P10-201ENST00000450021 1447 ntBASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 UNC93B2-201ENST00000285383 730 ntBASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 NEK4P2-201ENST00000580004 1012 ntBASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ERCC6LQ2NKX8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ERCC6LQ2NKX8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms