Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PCGF3-213ENST00000620529 1899 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.72■□□□□ 0.27
AP1S1P61966 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC254562.1-201ENST00000417586 456 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC079140.1-201ENST00000508039 487 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 KRT8P48-201ENST00000515599 1220 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC243562.1-201ENST00000560672 389 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC022145.2-201ENST00000598203 171 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.72■□□□□ 0.27
AP1S1P61966 AC006538.3-201ENST00000612495 578 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 AC079781.4-201ENST00000641908 219 ntBASIC16.72■□□□□ 0.27
AP1S1P61966 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.71■□□□□ 0.27
AP1S1P61966 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 UBALD1-205ENST00000590891 2641 ntBASIC16.71■□□□□ 0.27
AP1S1P61966 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 LINC01144-201ENST00000626198 1710 ntBASIC16.71■□□□□ 0.27
AP1S1P61966 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP1S1P61966 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
AP1S1P61966 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.71■□□□□ 0.27
AP1S1P61966 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.71■□□□□ 0.27
AP1S1P61966 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.71■□□□□ 0.27
AP1S1P61966 AL691403.2-201ENST00000618460 490 ntBASIC16.71■□□□□ 0.27
AP1S1P61966 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP1S1P61966 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.71■□□□□ 0.27
AP1S1P61966 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.71■□□□□ 0.27
AP1S1P61966 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S1P61966 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.7■□□□□ 0.26
AP1S1P61966 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.7■□□□□ 0.26
AP1S1P61966 KRT8P23-201ENST00000560090 1207 ntBASIC16.7■□□□□ 0.26
AP1S1P61966 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 GPALPP1-207ENST00000611650 899 ntBASIC16.7■□□□□ 0.26
AP1S1P61966 AC008267.7-201ENST00000624570 1194 ntBASIC16.7■□□□□ 0.26
AP1S1P61966 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms