Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 AC132938.5-201ENST00000624980 1813 ntBASIC15.69■□□□□ 0.1
RPS3AP61247 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 AL031284.1-201ENST00000419297 478 ntBASIC15.69■□□□□ 0.1
RPS3AP61247 BX005266.1-201ENST00000473402 457 ntBASIC15.69■□□□□ 0.1
RPS3AP61247 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 OR7E14P-202ENST00000530490 1290 ntBASIC15.69■□□□□ 0.1
RPS3AP61247 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 MTDHP4-201ENST00000600287 670 ntBASIC15.69■□□□□ 0.1
RPS3AP61247 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RPS3AP61247 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS3AP61247 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.69■□□□□ 0.1
RPS3AP61247 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RPS3AP61247 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 AC078925.2-201ENST00000624013 1973 ntBASIC15.68■□□□□ 0.1
RPS3AP61247 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RPS3AP61247 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 MRPL3P1-201ENST00000400109 1033 ntBASIC15.68■□□□□ 0.1
RPS3AP61247 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 AC018712.1-201ENST00000455767 687 ntBASIC15.68■□□□□ 0.1
RPS3AP61247 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 AC079776.4-201ENST00000511039 504 ntBASIC15.68■□□□□ 0.1
RPS3AP61247 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.68■□□□□ 0.1
RPS3AP61247 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPS3AP61247 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS3AP61247 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS3AP61247 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPS3AP61247 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 AC009336.1-201ENST00000608941 1553 ntBASIC15.67■□□□□ 0.1
RPS3AP61247 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPS3AP61247 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RPS3AP61247 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS3AP61247 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS3AP61247 LAGE3P1-201ENST00000425356 484 ntBASIC15.67■□□□□ 0.1
RPS3AP61247 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RPS3AP61247 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RPS3AP61247 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPS3AP61247 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS3AP61247 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS3AP61247 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS3AP61247 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms