Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLDN6P56747 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN6P56747 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CLDN6P56747 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.92■□□□□ 0.14
CLDN6P56747 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN6P56747 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
CLDN6P56747 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN6P56747 KRT18P34-201ENST00000488218 1270 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CLDN6P56747 AC135586.1-201ENST00000539323 574 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN6P56747 BANF1P1-201ENST00000553684 263 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.92■□□□□ 0.14
CLDN6P56747 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.92■□□□□ 0.14
CLDN6P56747 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN6P56747 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 AC073389.1-201ENST00000595595 795 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 CHCHD2P3-201ENST00000603038 451 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 MIR6799-201ENST00000620297 69 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN6P56747 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN6P56747 CETN4P-206ENST00000642099 2168 ntBASIC15.92■□□□□ 0.14
CLDN6P56747 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN6P56747 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN6P56747 MIR1909-201ENST00000411312 80 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN6P56747 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CLDN6P56747 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 SPDYE18-201ENST00000510091 1050 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 PRYP6-201ENST00000514804 343 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN6P56747 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 AC008494.3-201ENST00000606615 944 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 RN7SL828P-201ENST00000607615 303 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN6P56747 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 AC087499.5-201ENST00000452760 1342 ntBASIC15.91■□□□□ 0.14
CLDN6P56747 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN6P56747 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN6P56747 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 AC133963.1-201ENST00000504166 1679 ntBASIC15.9■□□□□ 0.14
CLDN6P56747 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN6P56747 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms