Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AL603756.1-201ENST00000606511 2163 ntBASIC17.63■□□□□ 0.41
CACNA2D1P54289 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC079140.1-201ENST00000508039 487 ntBASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 RARRES2P8-201ENST00000566335 367 ntBASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 AC016027.1-202ENST00000607927 1699 ntBASIC17.63■□□□□ 0.41
CACNA2D1P54289 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 MST1L-201ENST00000442552 2185 ntBASIC17.63■□□□□ 0.41
CACNA2D1P54289 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA2D1P54289 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA2D1P54289 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
CACNA2D1P54289 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 PMS2P4-201ENST00000412466 1052 ntBASIC17.62■□□□□ 0.41
CACNA2D1P54289 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 AP000344.2-201ENST00000512987 629 ntBASIC17.62■□□□□ 0.41
CACNA2D1P54289 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 MIR3909-201ENST00000579518 119 ntBASIC17.62■□□□□ 0.41
CACNA2D1P54289 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.62■□□□□ 0.41
CACNA2D1P54289 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms