Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF140P52738 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF140P52738 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
ZNF140P52738 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ZNF140P52738 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF140P52738 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF140P52738 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF140P52738 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 AC091812.2-201ENST00000619081 385 ntBASIC16.51■□□□□ 0.23
ZNF140P52738 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF140P52738 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF140P52738 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ZNF140P52738 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF140P52738 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ZNF140P52738 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 MCCD1P2-201ENST00000423228 335 ntBASIC16.5■□□□□ 0.23
ZNF140P52738 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 KRT18P34-201ENST00000488218 1270 ntBASIC16.5■□□□□ 0.23
ZNF140P52738 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF140P52738 AC112191.1-201ENST00000523689 701 ntBASIC16.5■□□□□ 0.23
ZNF140P52738 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.5■□□□□ 0.23
ZNF140P52738 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF140P52738 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF140P52738 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ZNF140P52738 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF140P52738 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF140P52738 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF140P52738 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms