Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLCN3P51790 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 GGT4P-201ENST00000623672 1708 ntBASIC18.2■□□□□ 0.5
CLCN3P51790 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 GPAA1P2-202ENST00000606848 1787 ntBASIC18.2■□□□□ 0.5
CLCN3P51790 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 HLA-H-201ENST00000383620 1096 ntBASIC18.2■□□□□ 0.5
CLCN3P51790 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 BASP1P1-201ENST00000430708 665 ntBASIC18.2■□□□□ 0.5
CLCN3P51790 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN3P51790 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN3P51790 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN3P51790 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN3P51790 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN3P51790 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN3P51790 PKD1P1-201ENST00000458669 6805 ntBASIC18.19■□□□□ 0.5
CLCN3P51790 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.19■□□□□ 0.5
CLCN3P51790 AC092580.3-201ENST00000430932 139 ntBASIC18.19■□□□□ 0.5
CLCN3P51790 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 AC097493.3-201ENST00000509725 367 ntBASIC18.19■□□□□ 0.5
CLCN3P51790 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN3P51790 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN3P51790 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 AL158211.3-201ENST00000607385 239 ntBASIC18.19■□□□□ 0.5
CLCN3P51790 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN3P51790 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN3P51790 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLCN3P51790 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 AC078925.2-201ENST00000624013 1973 ntBASIC18.19■□□□□ 0.5
CLCN3P51790 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN3P51790 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLCN3P51790 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLCN3P51790 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CLCN3P51790 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN3P51790 INGX-202ENST00000489074 768 ntBASIC18.18■□□□□ 0.5
CLCN3P51790 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 RNA5SP421-201ENST00000516864 134 ntBASIC18.18■□□□□ 0.5
CLCN3P51790 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN3P51790 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.18■□□□□ 0.5
CLCN3P51790 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN3P51790 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN3P51790 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN3P51790 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 MIR4745-201ENST00000577608 62 ntBASIC18.18■□□□□ 0.5
CLCN3P51790 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN3P51790 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms