Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ASCL1P50553 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ASCL1P50553 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ASCL1P50553 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.83□□□□□ -0.04
ASCL1P50553 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ASCL1P50553 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ASCL1P50553 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ASCL1P50553 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ASCL1P50553 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.83□□□□□ -0.04
ASCL1P50553 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ASCL1P50553 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.83□□□□□ -0.04
ASCL1P50553 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ASCL1P50553 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 EGFEM1P-202ENST00000431685 1563 ntBASIC14.82□□□□□ -0.04
ASCL1P50553 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 PMS2P4-201ENST00000412466 1052 ntBASIC14.82□□□□□ -0.04
ASCL1P50553 SPCS2P4-201ENST00000436160 681 ntBASIC14.82□□□□□ -0.04
ASCL1P50553 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.82□□□□□ -0.04
ASCL1P50553 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.82□□□□□ -0.04
ASCL1P50553 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.82□□□□□ -0.04
ASCL1P50553 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.82□□□□□ -0.04
ASCL1P50553 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.82□□□□□ -0.04
ASCL1P50553 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 AP001350.2-201ENST00000625104 1094 ntBASIC14.82□□□□□ -0.04
ASCL1P50553 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ASCL1P50553 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ASCL1P50553 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ASCL1P50553 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.81□□□□□ -0.04
ASCL1P50553 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.81□□□□□ -0.04
ASCL1P50553 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
ASCL1P50553 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.81□□□□□ -0.04
ASCL1P50553 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.81□□□□□ -0.04
ASCL1P50553 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.81□□□□□ -0.04
ASCL1P50553 AC093214.1-201ENST00000511688 1107 ntBASIC14.81□□□□□ -0.04
ASCL1P50553 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.81□□□□□ -0.04
ASCL1P50553 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ASCL1P50553 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.81□□□□□ -0.04
ASCL1P50553 AC069262.1-201ENST00000539058 672 ntBASIC14.81□□□□□ -0.04
ASCL1P50553 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.81□□□□□ -0.04
ASCL1P50553 AL031055.1-201ENST00000606362 631 ntBASIC14.81□□□□□ -0.04
ASCL1P50553 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
ASCL1P50553 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ASCL1P50553 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 TOP3BP1-201ENST00000420768 1380 ntBASIC14.81□□□□□ -0.04
ASCL1P50553 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ASCL1P50553 WASH6P-202ENST00000359512 1437 ntBASIC14.81□□□□□ -0.04
ASCL1P50553 UXT-AS1-201ENST00000590504 1525 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms