Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 PCDHA1-201ENST00000378133 2726 ntBASIC15.17■□□□□ 0.02
CENPAP49450 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CENPAP49450 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CENPAP49450 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CENPAP49450 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.17■□□□□ 0.02
CENPAP49450 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CENPAP49450 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.17■□□□□ 0.02
CENPAP49450 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.17■□□□□ 0.02
CENPAP49450 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CENPAP49450 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 AC018695.7-201ENST00000624587 2492 ntBASIC15.16■□□□□ 0.02
CENPAP49450 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CENPAP49450 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.16■□□□□ 0.02
CENPAP49450 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.16■□□□□ 0.02
CENPAP49450 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 MIR3652-201ENST00000579335 131 ntBASIC15.16■□□□□ 0.02
CENPAP49450 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.16■□□□□ 0.02
CENPAP49450 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.16■□□□□ 0.02
CENPAP49450 AC079776.2-201ENST00000641154 1609 ntBASIC15.16■□□□□ 0.02
CENPAP49450 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.16■□□□□ 0.02
CENPAP49450 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CENPAP49450 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CENPAP49450 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CENPAP49450 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.15■□□□□ 0.02
CENPAP49450 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CENPAP49450 AP002414.1-201ENST00000391405 1147 ntBASIC15.15■□□□□ 0.02
CENPAP49450 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CENPAP49450 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.15■□□□□ 0.02
CENPAP49450 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CENPAP49450 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.15■□□□□ 0.02
CENPAP49450 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.15■□□□□ 0.02
CENPAP49450 AP001269.4-201ENST00000609611 512 ntBASIC15.15■□□□□ 0.02
CENPAP49450 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.15■□□□□ 0.02
CENPAP49450 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms