Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC9A3P48764 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC9A3P48764 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC9A3P48764 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC9A3P48764 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC9A3P48764 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC9A3P48764 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC9A3P48764 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SLC9A3P48764 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC9A3P48764 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC9A3P48764 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC9A3P48764 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC9A3P48764 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC9A3P48764 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC9A3P48764 AC132008.2-207ENST00000454517 770 ntBASIC15.33■□□□□ 0.04
SLC9A3P48764 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC9A3P48764 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC9A3P48764 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SLC9A3P48764 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC9A3P48764 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC9A3P48764 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC9A3P48764 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC9A3P48764 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC9A3P48764 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC9A3P48764 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
SLC9A3P48764 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SLC9A3P48764 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC9A3P48764 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC024909.3-201ENST00000611513 2257 ntBASIC15.32■□□□□ 0.04
SLC9A3P48764 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
SLC9A3P48764 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC9A3P48764 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC9A3P48764 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC9A3P48764 AL589182.2-201ENST00000619332 1049 ntBASIC15.32■□□□□ 0.04
SLC9A3P48764 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC9A3P48764 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 AL365203.3-201ENST00000609742 2057 ntBASIC15.32■□□□□ 0.04
SLC9A3P48764 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC9A3P48764 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 AC006538.1-201ENST00000567905 1585 ntBASIC15.32■□□□□ 0.04
SLC9A3P48764 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC9A3P48764 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC9A3P48764 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC9A3P48764 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms