Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A6P48664 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC1A6P48664 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A6P48664 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC1A6P48664 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A6P48664 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC1A6P48664 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC1A6P48664 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC1A6P48664 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC1A6P48664 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A6P48664 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A6P48664 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SLC1A6P48664 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A6P48664 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
SLC1A6P48664 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 AL353135.1-201ENST00000606729 504 ntBASIC16.41■□□□□ 0.22
SLC1A6P48664 AC066615.1-201ENST00000640911 628 ntBASIC16.41■□□□□ 0.22
SLC1A6P48664 KRT8P39-201ENST00000396270 1433 ntBASIC16.41■□□□□ 0.22
SLC1A6P48664 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC1A6P48664 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A6P48664 AC079776.2-201ENST00000641154 1609 ntBASIC16.41■□□□□ 0.22
SLC1A6P48664 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 AP005117.1-202ENST00000581724 1908 ntBASIC16.41■□□□□ 0.22
SLC1A6P48664 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A6P48664 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 REXO1L8P-201ENST00000604378 1897 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A6P48664 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 DUX4L26-201ENST00000489078 1255 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC1A6P48664 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 AC010331.1-201ENST00000611423 582 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 AC114341.1-201ENST00000618070 349 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 AC068418.2-201ENST00000577309 3703 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 AC023824.1-201ENST00000562945 2975 ntBASIC16.4■□□□□ 0.22
SLC1A6P48664 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.4■□□□□ 0.22
SLC1A6P48664 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A6P48664 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A6P48664 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A6P48664 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A6P48664 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 MST1L-201ENST00000442552 2185 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms