Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.61□□□□□ -0.23
CEACAM3P40198 MIR4492-201ENST00000581627 80 ntBASIC13.61□□□□□ -0.23
CEACAM3P40198 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CEACAM3P40198 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CEACAM3P40198 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.61□□□□□ -0.23
CEACAM3P40198 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
CEACAM3P40198 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CEACAM3P40198 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CEACAM3P40198 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
CEACAM3P40198 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 MIR574-201ENST00000385209 96 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
CEACAM3P40198 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
CEACAM3P40198 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.6□□□□□ -0.23
CEACAM3P40198 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 AC002347.1-201ENST00000569543 541 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.6□□□□□ -0.23
CEACAM3P40198 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.6□□□□□ -0.23
CEACAM3P40198 AC084018.2-201ENST00000613093 2607 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 AC004877.2-201ENST00000623941 599 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
CEACAM3P40198 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CEACAM3P40198 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 AL596257.1-201ENST00000641463 2694 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.6□□□□□ -0.23
CEACAM3P40198 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CEACAM3P40198 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.6□□□□□ -0.23
CEACAM3P40198 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 PMS2P7-201ENST00000506558 1336 ntBASIC13.6□□□□□ -0.23
CEACAM3P40198 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.6□□□□□ -0.23
CEACAM3P40198 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM3P40198 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 SLC22A20-204ENST00000530038 1673 ntBASIC13.59□□□□□ -0.23
CEACAM3P40198 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 AL162727.3-201ENST00000635661 2787 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms