Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 AC109635.5-201ENST00000533593 962 ntBASIC19.06■□□□□ 0.64
KRT2P35908 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT2P35908 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.06■□□□□ 0.64
KRT2P35908 AC092865.6-201ENST00000642101 219 ntBASIC19.06■□□□□ 0.64
KRT2P35908 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT2P35908 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT2P35908 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT2P35908 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
KRT2P35908 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRT2P35908 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT2P35908 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 MIR940-201ENST00000401276 94 ntBASIC19.05■□□□□ 0.64
KRT2P35908 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT2P35908 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 AC074386.1-202ENST00000463561 864 ntBASIC19.05■□□□□ 0.64
KRT2P35908 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT2P35908 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT2P35908 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT2P35908 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT2P35908 LINC01144-201ENST00000626198 1710 ntBASIC19.05■□□□□ 0.64
KRT2P35908 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT2P35908 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 AC092919.2-201ENST00000623631 1645 ntBASIC19.04■□□□□ 0.64
KRT2P35908 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 AC068137.2-201ENST00000605408 478 ntBASIC19.04■□□□□ 0.64
KRT2P35908 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT2P35908 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT2P35908 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT2P35908 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT2P35908 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT2P35908 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT2P35908 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT2P35908 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT2P35908 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT2P35908 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT2P35908 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT2P35908 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT2P35908 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms