Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXC12P31275 AC107918.2-201ENST00000530817 355 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC12P31275 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXC12P31275 AC004449.1-201ENST00000564240 433 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 AC138761.1-201ENST00000584393 385 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXC12P31275 AC012569.1-201ENST00000591191 1524 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 AC068137.2-201ENST00000605408 478 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC12P31275 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC12P31275 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXC12P31275 AC025580.3-201ENST00000617932 1424 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 AC093512.1-201ENST00000617969 520 ntBASIC14.79□□□□□ -0.04
HOXC12P31275 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
HOXC12P31275 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXC12P31275 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HOXC12P31275 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC12P31275 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC12P31275 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC12P31275 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC12P31275 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.78□□□□□ -0.04
HOXC12P31275 AC074386.1-202ENST00000463561 864 ntBASIC14.78□□□□□ -0.04
HOXC12P31275 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.78□□□□□ -0.04
HOXC12P31275 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.78□□□□□ -0.04
HOXC12P31275 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 AC087641.1-201ENST00000557561 1021 ntBASIC14.78□□□□□ -0.04
HOXC12P31275 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC12P31275 AC004835.2-201ENST00000603762 682 ntBASIC14.78□□□□□ -0.04
HOXC12P31275 ACTL9-202ENST00000612068 1252 ntBASIC14.78□□□□□ -0.04
HOXC12P31275 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC12P31275 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC12P31275 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC12P31275 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC12P31275 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXC12P31275 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HOXC12P31275 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HOXC12P31275 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXC12P31275 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC12P31275 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC12P31275 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC12P31275 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXC12P31275 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXC12P31275 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC12P31275 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.77□□□□□ -0.04
HOXC12P31275 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXC12P31275 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC12P31275 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC12P31275 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXC12P31275 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms