Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.47■□□□□ 0.39
MMP8P22894 AC092474.2-201ENST00000424288 719 ntBASIC17.47■□□□□ 0.39
MMP8P22894 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP8P22894 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.47■□□□□ 0.39
MMP8P22894 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.47■□□□□ 0.39
MMP8P22894 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
MMP8P22894 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP8P22894 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MMP8P22894 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP8P22894 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 AL513523.2-202ENST00000427283 2040 ntBASIC17.47■□□□□ 0.39
MMP8P22894 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP8P22894 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MMP8P22894 PKD1P1-201ENST00000458669 6805 ntBASIC17.47■□□□□ 0.39
MMP8P22894 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP8P22894 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MMP8P22894 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.46■□□□□ 0.39
MMP8P22894 AL591424.1-201ENST00000442569 1213 ntBASIC17.46■□□□□ 0.39
MMP8P22894 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP8P22894 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP8P22894 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
MMP8P22894 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP8P22894 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.46■□□□□ 0.39
MMP8P22894 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.46■□□□□ 0.39
MMP8P22894 AC140113.2-201ENST00000604370 208 ntBASIC17.46■□□□□ 0.39
MMP8P22894 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.46■□□□□ 0.39
MMP8P22894 AC027601.4-201ENST00000611259 610 ntBASIC17.46■□□□□ 0.39
MMP8P22894 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP8P22894 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP8P22894 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MMP8P22894 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MMP8P22894 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
MMP8P22894 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MMP8P22894 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.45■□□□□ 0.38
MMP8P22894 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms