Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 MCCD1P2-201ENST00000423228 335 ntBASIC16.37■□□□□ 0.21
CDH3P22223 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 KRT19P2-202ENST00000557173 1012 ntBASIC16.37■□□□□ 0.21
CDH3P22223 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.37■□□□□ 0.21
CDH3P22223 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH3P22223 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CDH3P22223 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH3P22223 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH3P22223 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH3P22223 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH3P22223 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH3P22223 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH3P22223 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.36■□□□□ 0.21
CDH3P22223 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDH3P22223 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH3P22223 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH3P22223 SLC25A1P3-201ENST00000395415 828 ntBASIC16.36■□□□□ 0.21
CDH3P22223 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH3P22223 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDH3P22223 AC112482.1-201ENST00000492080 688 ntBASIC16.36■□□□□ 0.21
CDH3P22223 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH3P22223 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH3P22223 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH3P22223 PDPK2P-202ENST00000562415 1191 ntBASIC16.36■□□□□ 0.21
CDH3P22223 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH3P22223 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDH3P22223 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH3P22223 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH3P22223 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 PCDHA14-201ENST00000506751 2298 ntBASIC16.35■□□□□ 0.21
CDH3P22223 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH3P22223 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms