Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AC021097.1-201ENST00000607902 574 ntBASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AC027601.4-201ENST00000611259 610 ntBASIC16.8■□□□□ 0.28
HLA-DPA1P20036 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
HLA-DPA1P20036 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPA1P20036 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 BCAR1-209ENST00000546196 1340 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 MED15P5-201ENST00000423150 992 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 AP000347.1-202ENST00000435868 847 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 RNA5SP416-201ENST00000516838 111 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 FAM197Y3-203ENST00000618346 717 ntBASIC16.79■□□□□ 0.28
HLA-DPA1P20036 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPA1P20036 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 KRT18P2-201ENST00000447938 1258 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC018845.2-201ENST00000568326 409 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms