Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NFKB1P19838 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.93■□□□□ 0.3
NFKB1P19838 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NFKB1P19838 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NFKB1P19838 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.92■□□□□ 0.3
NFKB1P19838 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NFKB1P19838 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 AC026396.1-201ENST00000419388 421 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 RHOQP3-201ENST00000437982 621 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.92■□□□□ 0.3
NFKB1P19838 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.92■□□□□ 0.3
NFKB1P19838 AC018845.2-201ENST00000568326 409 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.92■□□□□ 0.3
NFKB1P19838 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.92■□□□□ 0.3
NFKB1P19838 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.92■□□□□ 0.3
NFKB1P19838 AC120114.3-201ENST00000611923 658 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 AL645728.2-201ENST00000641974 660 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.92■□□□□ 0.3
NFKB1P19838 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 AC018695.7-201ENST00000624587 2492 ntBASIC16.92■□□□□ 0.3
NFKB1P19838 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NFKB1P19838 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NFKB1P19838 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
NFKB1P19838 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 PCGF3-213ENST00000620529 1899 ntBASIC16.91■□□□□ 0.3
NFKB1P19838 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 CYP2T1P-202ENST00000641596 2535 ntBASIC16.91■□□□□ 0.3
NFKB1P19838 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.91■□□□□ 0.3
NFKB1P19838 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.91■□□□□ 0.3
NFKB1P19838 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 AL031055.1-201ENST00000606362 631 ntBASIC16.91■□□□□ 0.3
NFKB1P19838 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NFKB1P19838 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NFKB1P19838 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NFKB1P19838 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NFKB1P19838 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
NFKB1P19838 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NFKB1P19838 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms