Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.35■□□□□ 0.37
TCF4P15884 AC034105.1-201ENST00000563488 319 ntBASIC17.35■□□□□ 0.37
TCF4P15884 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 MIR4515-201ENST00000584082 81 ntBASIC17.35■□□□□ 0.37
TCF4P15884 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.35■□□□□ 0.37
TCF4P15884 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.35■□□□□ 0.37
TCF4P15884 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.35■□□□□ 0.37
TCF4P15884 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.35■□□□□ 0.37
TCF4P15884 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TCF4P15884 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.35■□□□□ 0.37
TCF4P15884 PCGF3-213ENST00000620529 1899 ntBASIC17.35■□□□□ 0.37
TCF4P15884 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.35■□□□□ 0.37
TCF4P15884 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TCF4P15884 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.35■□□□□ 0.37
TCF4P15884 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCF4P15884 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TCF4P15884 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.34■□□□□ 0.37
TCF4P15884 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TCF4P15884 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TCF4P15884 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.34■□□□□ 0.37
TCF4P15884 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 AC079776.4-201ENST00000511039 504 ntBASIC17.34■□□□□ 0.37
TCF4P15884 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.34■□□□□ 0.37
TCF4P15884 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.34■□□□□ 0.37
TCF4P15884 AC104109.2-201ENST00000602919 1418 ntBASIC17.34■□□□□ 0.37
TCF4P15884 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 Z83851.2-201ENST00000609564 659 ntBASIC17.34■□□□□ 0.37
TCF4P15884 AP001350.2-201ENST00000625104 1094 ntBASIC17.34■□□□□ 0.37
TCF4P15884 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TCF4P15884 MTHFR-217ENST00000641820 1569 ntBASIC17.34■□□□□ 0.37
TCF4P15884 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
TCF4P15884 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCF4P15884 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TCF4P15884 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.33■□□□□ 0.37
TCF4P15884 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.33■□□□□ 0.37
TCF4P15884 AL513523.2-202ENST00000427283 2040 ntBASIC17.33■□□□□ 0.37
TCF4P15884 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 REXO1L8P-201ENST00000604378 1897 ntBASIC17.33■□□□□ 0.37
TCF4P15884 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TCF4P15884 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCF4P15884 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TCF4P15884 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCF4P15884 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCF4P15884 RNU1-129P-201ENST00000384064 167 ntBASIC17.33■□□□□ 0.36
TCF4P15884 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TCF4P15884 KRT18P2-201ENST00000447938 1258 ntBASIC17.33■□□□□ 0.36
TCF4P15884 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.33■□□□□ 0.36
TCF4P15884 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TCF4P15884 AL513480.1-201ENST00000451731 511 ntBASIC17.33■□□□□ 0.36
TCF4P15884 AC093909.1-201ENST00000504731 1122 ntBASIC17.33■□□□□ 0.36
TCF4P15884 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.33■□□□□ 0.36
TCF4P15884 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCF4P15884 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.33■□□□□ 0.36
TCF4P15884 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.33■□□□□ 0.36
TCF4P15884 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
TCF4P15884 U1.21-201ENST00000580816 167 ntBASIC17.33■□□□□ 0.36
TCF4P15884 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.33■□□□□ 0.36
TCF4P15884 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.33■□□□□ 0.36
TCF4P15884 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms