Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.62□□□□□ -0.23
DEFA4P12838 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 EGFEM1P-202ENST00000431685 1563 ntBASIC13.62□□□□□ -0.23
DEFA4P12838 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA4P12838 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
DEFA4P12838 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
DEFA4P12838 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 UPK3BP1-201ENST00000428678 509 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.61□□□□□ -0.23
DEFA4P12838 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.61□□□□□ -0.23
DEFA4P12838 MIR3180-1-201ENST00000580374 94 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 MIR3180-3-201ENST00000584616 94 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 NPAP1P7-201ENST00000613027 823 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.61□□□□□ -0.23
DEFA4P12838 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
DEFA4P12838 CYP2T1P-202ENST00000641596 2535 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 AC024909.3-201ENST00000611513 2257 ntBASIC13.61□□□□□ -0.23
DEFA4P12838 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.61□□□□□ -0.23
DEFA4P12838 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DEFA4P12838 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 AL161772.1-201ENST00000610494 4412 ntBASIC13.6□□□□□ -0.23
DEFA4P12838 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
DEFA4P12838 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.6□□□□□ -0.23
DEFA4P12838 KRT16P4-201ENST00000453883 522 ntBASIC13.6□□□□□ -0.23
DEFA4P12838 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.6□□□□□ -0.23
DEFA4P12838 MIR5100-201ENST00000579544 119 ntBASIC13.6□□□□□ -0.23
DEFA4P12838 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.6□□□□□ -0.23
DEFA4P12838 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.6□□□□□ -0.23
DEFA4P12838 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.6□□□□□ -0.23
DEFA4P12838 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DEFA4P12838 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms