Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COL6A2P12110 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A2P12110 PMS2P1-201ENST00000431037 1228 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.48■□□□□ 0.23
COL6A2P12110 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.48■□□□□ 0.23
COL6A2P12110 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 AC087641.1-201ENST00000557561 1021 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.48■□□□□ 0.23
COL6A2P12110 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A2P12110 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.48■□□□□ 0.23
COL6A2P12110 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.48■□□□□ 0.23
COL6A2P12110 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 AC008608.2-201ENST00000606089 416 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
COL6A2P12110 GGTLC5P-201ENST00000617623 998 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A2P12110 SLC22A20-204ENST00000530038 1673 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A2P12110 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 AC105917.1-201ENST00000506637 2539 ntBASIC16.48■□□□□ 0.23
COL6A2P12110 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
COL6A2P12110 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL6A2P12110 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 AC129492.6-201ENST00000611383 1305 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A2P12110 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 HCG4-201ENST00000418983 998 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 KRT18P31-201ENST00000506277 1292 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.47■□□□□ 0.23
COL6A2P12110 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A2P12110 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.47■□□□□ 0.23
COL6A2P12110 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.47■□□□□ 0.23
COL6A2P12110 MIR3652-201ENST00000579335 131 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 AC005412.3-201ENST00000580309 715 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 AC006557.2-201ENST00000592985 1240 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 AC010654.1-201ENST00000615722 808 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 AC093458.2-201ENST00000623150 629 ntBASIC16.47■□□□□ 0.23
COL6A2P12110 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL6A2P12110 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.47■□□□□ 0.23
COL6A2P12110 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A2P12110 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A2P12110 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COL6A2P12110 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A2P12110 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A2P12110 AC024909.3-201ENST00000611513 2257 ntBASIC16.46■□□□□ 0.23
COL6A2P12110 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.46■□□□□ 0.23
COL6A2P12110 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A2P12110 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.46■□□□□ 0.23
COL6A2P12110 LAGE3P1-201ENST00000425356 484 ntBASIC16.46■□□□□ 0.23
COL6A2P12110 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.46■□□□□ 0.23
COL6A2P12110 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.46■□□□□ 0.23
COL6A2P12110 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A2P12110 AC107918.2-201ENST00000530817 355 ntBASIC16.46■□□□□ 0.23
COL6A2P12110 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.46■□□□□ 0.23
COL6A2P12110 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.46■□□□□ 0.23
COL6A2P12110 AC020765.3-201ENST00000613051 740 ntBASIC16.46■□□□□ 0.23
COL6A2P12110 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL6A2P12110 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms