Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCRP04035 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCRP04035 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCRP04035 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCRP04035 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.64■□□□□ 0.57
HMGCRP04035 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCRP04035 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCRP04035 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGCRP04035 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 MEP1AP4-201ENST00000423244 1087 ntBASIC18.63■□□□□ 0.57
HMGCRP04035 AC234783.1-201ENST00000441761 496 ntBASIC18.63■□□□□ 0.57
HMGCRP04035 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCRP04035 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.63■□□□□ 0.57
HMGCRP04035 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.63■□□□□ 0.57
HMGCRP04035 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
HMGCRP04035 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCRP04035 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.63■□□□□ 0.57
HMGCRP04035 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HMGCRP04035 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCRP04035 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMGCRP04035 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
HMGCRP04035 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCRP04035 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCRP04035 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HMGCRP04035 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 MYCLP2-201ENST00000449268 967 ntBASIC18.62■□□□□ 0.57
HMGCRP04035 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 MIR4525-201ENST00000580000 75 ntBASIC18.62■□□□□ 0.57
HMGCRP04035 MIR4259-201ENST00000584466 101 ntBASIC18.62■□□□□ 0.57
HMGCRP04035 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCRP04035 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.62■□□□□ 0.57
HMGCRP04035 SRD5A3P1-201ENST00000603021 949 ntBASIC18.62■□□□□ 0.57
HMGCRP04035 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCRP04035 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCRP04035 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCRP04035 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 AC016396.2-201ENST00000562575 1417 ntBASIC18.61■□□□□ 0.57
HMGCRP04035 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCRP04035 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HMGCRP04035 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.61■□□□□ 0.57
HMGCRP04035 AC119751.2-201ENST00000504529 210 ntBASIC18.61■□□□□ 0.57
HMGCRP04035 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.61■□□□□ 0.57
HMGCRP04035 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGCRP04035 TPRX2P-201ENST00000535362 881 ntBASIC18.61■□□□□ 0.57
HMGCRP04035 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCRP04035 AP005482.1-201ENST00000563722 1273 ntBASIC18.61■□□□□ 0.57
HMGCRP04035 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCRP04035 AC099568.2-201ENST00000609194 695 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms