Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ALOX12P2-203ENST00000570921 1945 ntBASIC15.01□□□□□ -0.01
HLA-DQA2P01906 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA2P01906 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 PC-204ENST00000524491 1714 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 LINC00895-201ENST00000629028 1637 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DQA2P01906 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15□□□□□ -0.01
HLA-DQA2P01906 KRT18P31-201ENST00000506277 1292 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 DUX4L17-201ENST00000557360 1267 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 AC091304.2-201ENST00000564639 760 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 AC008608.2-201ENST00000606089 416 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA2P01906 AL589182.2-201ENST00000619332 1049 ntBASIC15□□□□□ -0.01
HLA-DQA2P01906 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-DQA2P01906 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA2P01906 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DQA2P01906 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms