Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA1O95477 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA1O95477 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 SERBP1P5-201ENST00000510079 1181 ntBASIC13.98□□□□□ -0.17
ABCA1O95477 MIR6080-201ENST00000617359 66 ntBASIC13.98□□□□□ -0.17
ABCA1O95477 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.98□□□□□ -0.17
ABCA1O95477 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.98□□□□□ -0.17
ABCA1O95477 AC069120.2-201ENST00000524091 540 ntBASIC13.98□□□□□ -0.17
ABCA1O95477 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA1O95477 KRT8P23-201ENST00000560090 1207 ntBASIC13.98□□□□□ -0.17
ABCA1O95477 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
ABCA1O95477 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ABCA1O95477 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA1O95477 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.98□□□□□ -0.17
ABCA1O95477 FO538757.1-201ENST00000623083 1397 ntBASIC13.97□□□□□ -0.17
ABCA1O95477 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ABCA1O95477 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.97□□□□□ -0.17
ABCA1O95477 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCA1O95477 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCA1O95477 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.97□□□□□ -0.17
ABCA1O95477 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ABCA1O95477 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.97□□□□□ -0.17
ABCA1O95477 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 AL359881.2-201ENST00000602973 570 ntBASIC13.97□□□□□ -0.17
ABCA1O95477 AL662799.1-202ENST00000614205 422 ntBASIC13.97□□□□□ -0.17
ABCA1O95477 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ABCA1O95477 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.97□□□□□ -0.17
ABCA1O95477 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA1O95477 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 AC022211.2-201ENST00000585075 2527 ntBASIC13.96□□□□□ -0.17
ABCA1O95477 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ABCA1O95477 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCA1O95477 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms