Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.99□□□□□ -0.01
UBL3O95164 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBL3O95164 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBL3O95164 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBL3O95164 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBL3O95164 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBL3O95164 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBL3O95164 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBL3O95164 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.99□□□□□ -0.01
UBL3O95164 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL3O95164 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 AC006504.4-201ENST00000592118 1568 ntBASIC14.98□□□□□ -0.01
UBL3O95164 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL3O95164 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBL3O95164 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 AC024909.3-201ENST00000611513 2257 ntBASIC14.98□□□□□ -0.01
UBL3O95164 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 AP002414.1-201ENST00000391405 1147 ntBASIC14.98□□□□□ -0.01
UBL3O95164 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.98□□□□□ -0.01
UBL3O95164 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.98□□□□□ -0.01
UBL3O95164 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL3O95164 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.98□□□□□ -0.01
UBL3O95164 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
UBL3O95164 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.98□□□□□ -0.01
UBL3O95164 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBL3O95164 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 AC005052.1-201ENST00000625181 2492 ntBASIC14.97□□□□□ -0.01
UBL3O95164 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 AC073621.1-201ENST00000392730 636 ntBASIC14.97□□□□□ -0.01
UBL3O95164 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 AC026396.1-201ENST00000419388 421 ntBASIC14.97□□□□□ -0.01
UBL3O95164 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.97□□□□□ -0.01
UBL3O95164 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 MIR7706-201ENST00000613747 67 ntBASIC14.97□□□□□ -0.01
UBL3O95164 GGTLC5P-201ENST00000617623 998 ntBASIC14.97□□□□□ -0.01
UBL3O95164 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.97□□□□□ -0.01
UBL3O95164 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 AF228730.7-201ENST00000641842 219 ntBASIC14.97□□□□□ -0.01
UBL3O95164 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms