Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 PRYP5-201ENST00000451909 266 ntBASIC14.81□□□□□ -0.04
GMDSO60547 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
GMDSO60547 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.81□□□□□ -0.04
GMDSO60547 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 GPR89P-201ENST00000407924 1495 ntBASIC14.81□□□□□ -0.04
GMDSO60547 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.8□□□□□ -0.04
GMDSO60547 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.8□□□□□ -0.04
GMDSO60547 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.8□□□□□ -0.04
GMDSO60547 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.8□□□□□ -0.04
GMDSO60547 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 REXO1L6P-202ENST00000619970 1078 ntBASIC14.8□□□□□ -0.04
GMDSO60547 AL139288.1-201ENST00000623748 933 ntBASIC14.8□□□□□ -0.04
GMDSO60547 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.8□□□□□ -0.04
GMDSO60547 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
GMDSO60547 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.8□□□□□ -0.04
GMDSO60547 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GMDSO60547 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.8□□□□□ -0.04
GMDSO60547 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GMDSO60547 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.79□□□□□ -0.04
GMDSO60547 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.79□□□□□ -0.04
GMDSO60547 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GMDSO60547 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.79□□□□□ -0.04
GMDSO60547 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.79□□□□□ -0.04
GMDSO60547 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.79□□□□□ -0.04
GMDSO60547 SAPCD2P3-201ENST00000455031 850 ntBASIC14.79□□□□□ -0.04
GMDSO60547 SCARNA2-201ENST00000458748 420 ntBASIC14.79□□□□□ -0.04
GMDSO60547 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.79□□□□□ -0.04
GMDSO60547 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GMDSO60547 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.79□□□□□ -0.04
GMDSO60547 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.79□□□□□ -0.04
GMDSO60547 MTDHP3-201ENST00000594186 672 ntBASIC14.79□□□□□ -0.04
GMDSO60547 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.79□□□□□ -0.04
GMDSO60547 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GMDSO60547 AL355877.3-201ENST00000622820 899 ntBASIC14.79□□□□□ -0.04
GMDSO60547 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GMDSO60547 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms