Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LCMT2O60294 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LCMT2O60294 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LCMT2O60294 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 AC002056.1-201ENST00000395613 760 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LCMT2O60294 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.9■□□□□ 0.14
LCMT2O60294 FAM58CP-201ENST00000435741 640 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.9■□□□□ 0.14
LCMT2O60294 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.9■□□□□ 0.14
LCMT2O60294 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.9■□□□□ 0.14
LCMT2O60294 AC099522.2-201ENST00000607001 744 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 AL078644.1-201ENST00000609881 752 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 AC092902.6-201ENST00000641783 218 ntBASIC15.9■□□□□ 0.14
LCMT2O60294 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
LCMT2O60294 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LCMT2O60294 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 AL662844.4-201ENST00000606367 2838 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 ALG1L5P-201ENST00000482043 771 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 AC112482.1-201ENST00000492080 688 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.89■□□□□ 0.13
LCMT2O60294 AC112191.1-201ENST00000523689 701 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.89■□□□□ 0.13
LCMT2O60294 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 C20orf181-201ENST00000623918 480 ntBASIC15.89■□□□□ 0.13
LCMT2O60294 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.89■□□□□ 0.13
LCMT2O60294 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LCMT2O60294 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LCMT2O60294 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms