Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.26■□□□□ 0.35
MSI1O43347 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.26■□□□□ 0.35
MSI1O43347 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.26■□□□□ 0.35
MSI1O43347 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.26■□□□□ 0.35
MSI1O43347 AC004835.2-201ENST00000603762 682 ntBASIC17.26■□□□□ 0.35
MSI1O43347 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MSI1O43347 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 GGT4P-201ENST00000623672 1708 ntBASIC17.26■□□□□ 0.35
MSI1O43347 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.25■□□□□ 0.35
MSI1O43347 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
MSI1O43347 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 OR6D1P-203ENST00000641209 4860 ntBASIC17.25■□□□□ 0.35
MSI1O43347 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MSI1O43347 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 AL592309.1-201ENST00000443127 649 ntBASIC17.25■□□□□ 0.35
MSI1O43347 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.25■□□□□ 0.35
MSI1O43347 AC069335.1-201ENST00000489972 472 ntBASIC17.25■□□□□ 0.35
MSI1O43347 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.25■□□□□ 0.35
MSI1O43347 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
MSI1O43347 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.25■□□□□ 0.35
MSI1O43347 AL138918.1-201ENST00000568306 659 ntBASIC17.25■□□□□ 0.35
MSI1O43347 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.25■□□□□ 0.35
MSI1O43347 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.25■□□□□ 0.35
MSI1O43347 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.25■□□□□ 0.35
MSI1O43347 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.25■□□□□ 0.35
MSI1O43347 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MSI1O43347 AC011270.2-201ENST00000624293 2550 ntBASIC17.25■□□□□ 0.35
MSI1O43347 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
MSI1O43347 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MSI1O43347 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MSI1O43347 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 KRT18P34-201ENST00000488218 1270 ntBASIC17.24■□□□□ 0.35
MSI1O43347 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.24■□□□□ 0.35
MSI1O43347 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.24■□□□□ 0.35
MSI1O43347 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MSI1O43347 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.24■□□□□ 0.35
MSI1O43347 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.24■□□□□ 0.35
MSI1O43347 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms