Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC020914.3-201ENST00000594712 304 ntBASIC17.48■□□□□ 0.39
SOX1O00570 AC073592.3-201ENST00000625118 1834 ntBASIC17.48■□□□□ 0.39
SOX1O00570 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SOX1O00570 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SOX1O00570 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SOX1O00570 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX1O00570 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SOX1O00570 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SOX1O00570 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SOX1O00570 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SOX1O00570 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 KRT18P66-201ENST00000452970 1269 ntBASIC17.47■□□□□ 0.39
SOX1O00570 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.47■□□□□ 0.39
SOX1O00570 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 AL391069.4-201ENST00000609583 481 ntBASIC17.47■□□□□ 0.39
SOX1O00570 AC005702.4-201ENST00000618393 416 ntBASIC17.47■□□□□ 0.39
SOX1O00570 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.47■□□□□ 0.39
SOX1O00570 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.47■□□□□ 0.39
SOX1O00570 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.47■□□□□ 0.39
SOX1O00570 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.47■□□□□ 0.39
SOX1O00570 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SOX1O00570 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 AC004898.1-201ENST00000451057 766 ntBASIC17.46■□□□□ 0.39
SOX1O00570 Z93015.1-201ENST00000451718 390 ntBASIC17.46■□□□□ 0.39
SOX1O00570 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.46■□□□□ 0.39
SOX1O00570 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.46■□□□□ 0.39
SOX1O00570 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.46■□□□□ 0.39
SOX1O00570 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 AP006547.1-201ENST00000563435 692 ntBASIC17.46■□□□□ 0.39
SOX1O00570 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.46■□□□□ 0.39
SOX1O00570 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.46■□□□□ 0.39
SOX1O00570 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.46■□□□□ 0.39
SOX1O00570 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SOX1O00570 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 MSTO2P-201ENST00000314835 1709 ntBASIC17.46■□□□□ 0.39
SOX1O00570 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SOX1O00570 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SOX1O00570 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.46■□□□□ 0.38
SOX1O00570 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SOX1O00570 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.45■□□□□ 0.38
SOX1O00570 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SOX1O00570 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms