Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.92■□□□□ 0.14
PDLIM1O00151 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 MYCLP1-201ENST00000372451 1075 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 COX5BP2-201ENST00000392354 334 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 AC109462.3-201ENST00000573934 613 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.92■□□□□ 0.14
PDLIM1O00151 AC019129.2-201ENST00000609837 1235 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 AC093458.2-201ENST00000623150 629 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 ME2P1-201ENST00000426028 1970 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 AC026748.1-201ENST00000624349 3251 ntBASIC15.92■□□□□ 0.14
PDLIM1O00151 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDLIM1O00151 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PDLIM1O00151 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDLIM1O00151 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 DRAXINP1-201ENST00000437611 948 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 MTCL1P1-201ENST00000446207 792 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.91■□□□□ 0.14
PDLIM1O00151 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.91■□□□□ 0.14
PDLIM1O00151 AP002414.4-201ENST00000589764 1148 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 AL353801.3-201ENST00000609898 542 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.91■□□□□ 0.14
PDLIM1O00151 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.91■□□□□ 0.14
PDLIM1O00151 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 AC005089.1-201ENST00000619486 2241 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 AC010491.1-201ENST00000563101 2797 ntBASIC15.91■□□□□ 0.14
PDLIM1O00151 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.91■□□□□ 0.14
PDLIM1O00151 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDLIM1O00151 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PDLIM1O00151 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.9■□□□□ 0.14
PDLIM1O00151 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 GUSBP12-201ENST00000513727 720 ntBASIC15.9■□□□□ 0.14
PDLIM1O00151 IGHV3-52-201ENST00000519770 353 ntBASIC15.9■□□□□ 0.14
PDLIM1O00151 TPSP2-201ENST00000561760 610 ntBASIC15.9■□□□□ 0.14
PDLIM1O00151 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.9■□□□□ 0.14
PDLIM1O00151 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.9■□□□□ 0.14
PDLIM1O00151 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDLIM1O00151 AL592071.1-201ENST00000611956 408 ntBASIC15.9■□□□□ 0.14
PDLIM1O00151 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.9■□□□□ 0.14
PDLIM1O00151 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.9■□□□□ 0.14
PDLIM1O00151 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms