Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC112698.1-201ENST00000510299 916 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC083906.2-201ENST00000511578 360 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SLC25A1P4-201ENST00000567977 778 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DGCR10-201ENST00000609839 495 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC110285.5-201ENST00000611501 352 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC009154.2-201ENST00000621177 724 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MIR663A-201ENST00000385250 93 ntBASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms