Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 KRT18P28-201ENST00000453838 1332 ntBASIC19.16■□□□□ 0.66
PALM3A6NDB9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PALM3A6NDB9 PCGF3-213ENST00000620529 1899 ntBASIC19.16■□□□□ 0.66
PALM3A6NDB9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PALM3A6NDB9 UXT-AS1-201ENST00000590504 1525 ntBASIC19.15■□□□□ 0.66
PALM3A6NDB9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AC093724.1-201ENST00000448659 1027 ntBASIC19.15■□□□□ 0.66
PALM3A6NDB9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.15■□□□□ 0.66
PALM3A6NDB9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PALM3A6NDB9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PALM3A6NDB9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PALM3A6NDB9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 TSEN15P1-201ENST00000423257 515 ntBASIC19.14■□□□□ 0.65
PALM3A6NDB9 KRT18P32-201ENST00000424695 1287 ntBASIC19.14■□□□□ 0.65
PALM3A6NDB9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 LINC01144-201ENST00000626198 1710 ntBASIC19.14■□□□□ 0.65
PALM3A6NDB9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.14■□□□□ 0.65
PALM3A6NDB9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PALM3A6NDB9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.13■□□□□ 0.65
PALM3A6NDB9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.13■□□□□ 0.65
PALM3A6NDB9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PALM3A6NDB9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PALM3A6NDB9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PALM3A6NDB9 AC109322.1-201ENST00000524499 1264 ntBASIC19.13■□□□□ 0.65
PALM3A6NDB9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PALM3A6NDB9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms