Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AL031284.1-201ENST00000419297 478 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 FDX1P1-201ENST00000449115 551 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC009078.2-202ENST00000463353 338 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC108073.2-201ENST00000464002 357 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC107918.2-201ENST00000530817 355 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AL773604.1-201ENST00000617417 272 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC004790.2-201ENST00000623588 572 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC005593.1-201ENST00000624894 515 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AF228730.7-201ENST00000641842 219 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 AC006449.5-201ENST00000610658 2098 ntBASIC16.92■□□□□ 0.3
CCDC78A2IDD5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC78A2IDD5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC78A2IDD5 SLC22A20-204ENST00000530038 1673 ntBASIC16.91■□□□□ 0.3
CCDC78A2IDD5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 RPS2P28-201ENST00000314255 741 ntBASIC16.9■□□□□ 0.3
CCDC78A2IDD5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 MPDU1-223ENST00000582151 728 ntBASIC16.9■□□□□ 0.3
CCDC78A2IDD5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC78A2IDD5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms