Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.68□□□□□ -0.06
TRDV1A0A1B0GX56 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 AC011467.2-201ENST00000598425 242 ntBASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 TERC-201ENST00000602385 541 ntBASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 AC124864.1-201ENST00000623408 392 ntBASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRDV1A0A1B0GX56 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PCGF3-213ENST00000620529 1899 ntBASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 AC243591.1-201ENST00000452967 1364 ntBASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 MIR648-201ENST00000385046 94 ntBASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.66□□□□□ -0.06
TRDV1A0A1B0GX56 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms