Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 AC008040.2-201ENST00000461049 708 ntBASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 LINC02447-202ENST00000501888 2146 ntBASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 AC112504.1-201ENST00000623415 1841 ntBASIC12.65□□□□□ -0.39
TRAPPC1Q9Y5R8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
TRAPPC1Q9Y5R8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.65□□□□□ -0.39
TRAPPC1Q9Y5R8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 KRT18P65-201ENST00000439811 1286 ntBASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 CDC14C-201ENST00000428251 1719 ntBASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 AC005840.4-201ENST00000541242 2494 ntBASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAPPC1Q9Y5R8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms